miRBase entry: mse-mir-278

Stem-loop mse-mir-278


Accession
MI0021000
Description
Manduca sexta mse-mir-278 precursor miRNA


Sequence

agaacaguaucaagugcuacgcccggacgaacuucccaguucggccgacauuaaacgggUCGGUGGGAUCUUCGUCCGUUUguaucgcuuauacguauuucg
.(((..((((.(((((.((((..((((((((..(((((..((((((...........)))))))))))..))))))))..)))).)))))))))....))).

Structure
a   --ca    c     c    cc        cu     gu      gaca 
 gaa    guau aagug uacg  cggacgaa  uccca  ucggcc    u
 |||    |||| ||||| ||||  ||||||||  |||||  ||||||    u
 cuu    caua uucgc augU  GCCUGCUU  AGGGU  GGCUgg    a
g   uaug    -     u    UU        CU     --      gcaa 


Annotation confidence Not enough data
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Genome context
JH668429.1: 112880-112981 [-]

Database links

Mature mse-miR-278

Accession MIMAT0024451
Description Manduca sexta mse-miR-278 mature miRNA
Sequence 60 - UCGGUGGGAUCUUCGUCCGUUU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395