miRBase entry: mse-bantam

Stem-loop mse-bantam


Accession
MI0021001
Description
Manduca sexta mse-bantam precursor miRNA


Sequence

gcggaucgagauaaaaggaacuacgaaacugguuuucauaaugauuugacagauuuuguauucUGAGAUCAUUGUGAAAGCUAAUuuuguuccuaaaaca
...............((((((...((((.((((((((((((((((((..((((........)))))))))))))))))))))).))))))))))......

Structure
gcggaucgagauaaa      uac    c                  ga    uuu 
               aggaac   gaaa ugguuuucauaaugauuu  caga   u
               ||||||   |||| ||||||||||||||||||  ||||    
               uccuug   uuuU AUCGAAAGUGUUACUAGA  GUcu   g
---------acaaaa      ---    A                  --    uau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH668313.1: 1117498-1117597 [-]

Database links

Mature mse-bantam

Accession MIMAT0024452
Description Manduca sexta mse-bantam mature miRNA
Sequence 64 - UGAGAUCAUUGUGAAAGCUAAU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395