miRBase entry: mse-mir-2a

Stem-loop mse-mir-2a

Accession

MI0021029

Description

Manduca sexta mse-mir-2a precursor miRNA

Sequence

aagaauucaaugaggcccugccaucaaagucggcuugucauagaucauugcgaagcuaUCACAGCCAGCUUUGAUGAGCAcggccccauguguaugucc
.........(((.((((.((((((((((((.((((.((.((((.((.....))..)))).)))))).))))))))).))).)))).)))..........

Structure

-aagaauuca   a    c   -         c    u  c    -a  a 
          aug ggcc ugc caucaaagu ggcu gu auag  uc u
          ||| |||| ||| ||||||||| |||| || ||||  || u
          uac ccgg ACG GUAGUUUCG CCGA CA Uauc  ag g
ccuguaugug   c    c   A         A    -  C    ga  c

Annotation confidence Not enough data

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Genome context

JH668296.1: 1650050-1650148 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-2a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-2a

Accession	MIMAT0024479
Description	Manduca sexta mse-miR-2a mature miRNA
Sequence	59 - UCACAGCCAGCUUUGAUGAGCA - 80
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395