miRBase entry: mse-mir-2797b

Stem-loop mse-mir-2797b

Accession

MI0021050

Description

Manduca sexta mse-mir-2797b precursor miRNA

Sequence

acaugaagagcaagccaaauuuuguugaugauaUAAGUAGAUACUUCUAGGCUUUguuuuuuauuaaagccuaaaaaugucuacuaguauuauugguaaaac
...................(((((((((((((((.((((((((.((.(((((((((........))))))))).)).)))))))).))))))))))))))).

Structure

acaugaagagcaagccaaa               A        C  C         uuu 
                   uuuuguugaugauaU AGUAGAUA UU UAGGCUUUg   u
                   ||||||||||||||| |||||||| || |||||||||    
                   aaaaugguuauuaug ucaucugu aa auccgaaau   u
------------------c               a        a  a         uau

Annotation confidence Not enough data

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Genome context

AIXA01017703.1: 1413-1514 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-2797b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-2797b

Accession	MIMAT0024500
Description	Manduca sexta mse-miR-2797b mature miRNA
Sequence	34 - UAAGUAGAUACUUCUAGGCUUU - 55
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395