miRBase entry: mse-mir-6095-1

Stem-loop mse-mir-6095-1

Accession

MI0021053

Description

Manduca sexta mse-mir-6095-1 precursor miRNA

Sequence

cuucaugguacgacauuacaugauauaacacuaauauguccauuuccauuucaugauucgcacgaCAUAGAAAUGAACAUAUUGUUGAcauauuauguauuca
....(((......)))((((((((((..((.((((((((.((((((.((.((.((.....)).)).)).)))))).)))))))).))..))))))))))....

Structure

cuucaugguacgacau          aa  c        c      c  u  a  a 
                uacaugauau  ca uaauaugu cauuuc au uc ug u
                ||||||||||  || |||||||| |||||| || || || u
                auguauuaua  GU GUUAUACA GUAAAG UA ag ac c
------------acuu          cA  U        A      A  C  c  g

Annotation confidence Not enough data

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Genome context

JH668503.1: 87086-87188 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mse-mir-6095-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-6095

Accession	MIMAT0024503
Description	Manduca sexta mse-miR-6095 mature miRNA
Sequence	66 - CAUAGAAAUGAACAUAUUGUUGA - 88
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395