miRBase entry: mse-mir-6095-3

Stem-loop mse-mir-6095-3

Accession

MI0021055

Description

Manduca sexta mse-mir-6095-3 precursor miRNA

Sequence

aguuacgacguuacaugguauaacacuaguauguccauuuccauuucauaauucacacgaCAUAGAAAUGAACAUAUUGUUGAuauauuauguauucauucguca
....((((...(((((((((((.((.((((((((.((((((.((.((...........)).)).)))))).)))))))).)).))))))))))).....))))..

Structure

aguu    --cgu           a  c        c      c  u  auaa 
    acga     uacaugguaua ca uaguaugu cauuuc au uc    u
    ||||     ||||||||||| || |||||||| |||||| || ||    u
    ugcu     auguauuauau GU GUUAUACA GUAAAG UA ag    c
--ac    uacuu           A  U        A      A  C  caca

Annotation confidence Not enough data

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Genome context

JH668503.1: 87334-87438 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mse-mir-6095-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-6095

Accession	MIMAT0024503
Description	Manduca sexta mse-miR-6095 mature miRNA
Sequence	61 - CAUAGAAAUGAACAUAUUGUUGA - 83
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395