Stem-loop mse-mir-6096-1

Accession

MI0021056

Description

Manduca sexta mse-mir-6096-1 precursor miRNA

Sequence

uuuauuaucgagugcuacagaacaucauugucgguggccugacucauaauaauuggaucaugucgucaAAUAUUAUGAGGUCGGUCAACGacaguggcgauca
...................((.(.(((((((((.(((((.(((((((((((.((((.........)))).)))))))).)))))))).))))))))).).)).

Structure

uuuauuaucgagugcuaca  a a         g     u   -        a    auc 
                   ga c ucauugucg uggcc gac ucauaaua uugg   a
                   || | ||||||||| ||||| ||| |||||||| ||||   u
                   cu g ggugacaGC ACUGG CUG AGUAUUAU Aacu   g
------------------a  a c         A     -   G        A    gcu 

Annotation confidence Not enough data

Genome context

JH668665.1: 28973-29075 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-6096-1

Mature mse-miR-6096

• Accession: MIMAT0024504
• Description: Manduca sexta mse-miR-6096 mature miRNA
• Sequence: 69 - AAUAUUAUGAGGUCGGUCAACG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395