miRBase entry: mse-mir-6101

Stem-loop mse-mir-6101


Accession
MI0021063
Description
Manduca sexta mse-mir-6101 precursor miRNA


Sequence

uccucucaguaguaauaaauauaAAUGACCCUGUUUACACAUAUAUauauaaaugauauacauacauauguguacagggucauuuugacauugcguuacuaa
.........(((((((.(((..((((((((((((..((((((((.(((.((.......)).))).))))))))))))))))))))....)))..))))))).

Structure
uccucucag       -a   --au            UU        A   a  aa 
         uaguaau  aau    aAAUGACCCUGU  ACACAUAU Uau ua  u
         |||||||  |||    ||||||||||||  |||||||| ||| ||  g
         aucauug  uua    uuuacugggaca  uguguaua aua au  a
--------a       cg   cagu            --        c   c  au 


Annotation confidence Not enough data
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Genome context
JH668627.1: 129469-129570 [-]

Database links

Mature mse-miR-6101

Accession MIMAT0024509
Description Manduca sexta mse-miR-6101 mature miRNA
Sequence 24 - AAUGACCCUGUUUACACAUAUAU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395