Stem-loop cca-MIR156c

Accession

MI0021066

Description

Cynara cardunculus cca-MIR156c precursor miRNA

Literature search

4 open access papers mention cca-MIR156c
(11 sentences)

Sequence

ggaugUUGACAGAAGAUAGAGAGCACugagaggacaugaagugcauauauauaaugcaccucgcuucuuugugcucuuuauacuucugucauuacccu
((.((.((((((((((((((((((((.((((((...(((.((((((.......)))))).))))))))).))))))))))).))))))))).)).)).

Structure

-  a  U         -           u      aca   a      au 
 gg ug UGACAGAAG AUAGAGAGCAC gagagg   uga gugcau  a
 || || ||||||||| ||||||||||| ||||||   ||| ||||||  u
 cc au acugucuuc uauuucucgug uucuuc   gcu cacgua  a
u  c  u         a           u      ---   c      au 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR156c

• Accession: MIMAT0024512
• Description: Cynara cardunculus cca-miR156c mature miRNA
• Sequence: 6 - UUGACAGAAGAUAGAGAGCAC - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41