Stem-loop cca-MIR160a

Accession

MI0021067

Description

Cynara cardunculus cca-MIR160a precursor miRNA

Literature search

3 open access papers mention cca-MIR160a
(3 sentences)

Sequence

augauuUGCCUGGCUCCCUGGAUGCCAucuaagaaaaugauuucaagguugcaaucagucuucuuauauggcaccugaggagucaggcaaacauaa
(((.((((((((((((((.((.((((((.((((((..(((((.((....)).)))))...)))))).)))))))).).))))))))))))))))..

Structure

--   a             - U  A      c      -aa     u  a 
  aug uuUGCCUGGCUCC C GG UGCCAu uaagaa   ugauu ca g
  ||| ||||||||||||| | || |||||| ||||||   ||||| ||  
  uac aaacggacugagg g cc acggua auucuu   acuaa gu g
aa   -             a u  -      u      cug     c  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR160a

• Accession: MIMAT0024513
• Description: Cynara cardunculus cca-miR160a mature miRNA
• Sequence: 7 - UGCCUGGCUCCCUGGAUGCCA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41