Stem-loop cca-MIR6103

Accession

MI0021088

Description

Cynara cardunculus cca-MIR6103 precursor miRNA

Sequence

cauuccaUGUCUAAGACAACUCCUUGGAacauacaucugccucuuugccccccuguaaauguuguugcaaagugccagaugugugugcCAAGAAGUUGUCUUAGGCAUGuuaugagc
(((..((((((((((((((((.(((((.(((((((((((.(.((((((..................)))))).).))))))))))).))))).))))))))))))))))..)))...

Structure

---   uc                C     A           c u      cccccugu 
   cau  caUGUCUAAGACAACU CUUGG acauacaucug c cuuugc        a
   |||  |||||||||||||||| ||||| ||||||||||| | ||||||         
   gua  GUACGGAUUCUGUUGA GAACc uguguguagac g gaaacg        a
cga   uu                A     g           c u      uuguugua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR6103-5p

• Accession: MIMAT0024535
• Description: Cynara cardunculus cca-miR6103-5p mature miRNA
• Sequence: 8 - UGUCUAAGACAACUCCUUGGA - 28
• Evidence: experimental ; Illumina [1]

Mature cca-miR6103-3p

• Accession: MIMAT0024536
• Description: Cynara cardunculus cca-miR6103-3p mature miRNA
• Sequence: 89 - CAAGAAGUUGUCUUAGGCAUG - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41