Stem-loop cca-MIR6108g

Accession

MI0021095

Description

Cynara cardunculus cca-MIR6108g precursor miRNA

Literature search

1 open access papers mention cca-MIR6108g
(2 sentences)

Sequence

uggaugucccuucuuaaccuucugaacgcaacccaaccucaguuaguugauuaacuggguuggauuccggUGAGAAGCGUAAGAAGGGAUCcccaccc
(((..(((((((((((..(((((.(.((.((.((((((.((((((......)))))))))))).)).)).).)))))..)))))))))))..)))...

Structure

---   au           ac     g a  c  c      u      gu 
   ugg  gucccuucuua  cuucu a cg aa ccaacc caguua  u
   |||  |||||||||||  ||||| | || || |||||| ||||||   
   acc  UAGGGAAGAAU  GAAGA U gc uu gguugg gucaau  g
ccc   cC           GC     G g  c  a      -      ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR6108g

• Accession: MIMAT0024544
• Description: Cynara cardunculus cca-miR6108g mature miRNA
• Sequence: 71 - UGAGAAGCGUAAGAAGGGAUC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41