Stem-loop cca-MIR6109

Accession

MI0021097

Description

Cynara cardunculus cca-MIR6109 precursor miRNA

Sequence

aagaauAUGGACGUGUUAUUCAUCAUGAAUauuguaacauauucaucaugaauguguuauuuaugaugaauaacacaucccauauucauu
..(((((((((.((((((((((((((((.....((((((((((((...)))))))))))))))))))))))))))).).))))))))...

Structure

-aa        - C                AUauu            u 
   gaauAUGG A GUGUUAUUCAUCAUGA     guaacauauuca  
   |||||||| | ||||||||||||||||     |||||||||||| c
   cuuauacc u cacaauaaguaguauu     uauuguguaagu  
uua        c a                -----            a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR6109

• Accession: MIMAT0024546
• Description: Cynara cardunculus cca-miR6109 mature miRNA
• Sequence: 7 - AUGGACGUGUUAUUCAUCAUGAAU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41