miRBase entry: bta-mir-450b

Stem-loop bta-mir-450b


Accession
MI0021121
Description
Bos taurus bta-mir-450b precursor miRNA
Gene family
MIPF0000128; mir-450

Literature search
5 open access papers mention bta-mir-450b
(8 sentences)

Sequence

11246 reads, 132 reads per million, 67 experiments
aaaauuauUUUUGCAAUAUGUUCCUGAAUAuuuaauauaaguauauugggaacauuuugcauccauaguuuuguaucaguauuuag
((((((((...(((((.(((((((((((((((((...))))))).)))))))))).)))))...))))))))..............

Structure
--------------        UUU     U          -       a 
              aaaauuau   UGCAA AUGUUCCUGA AUAuuua  
              ||||||||   ||||| |||||||||| ||||||| u
              uuuugaua   acguu uacaaggguu uaugaau  
gauuuaugacuaug        ccu     u          a       a 


Annotation confidence Not enough data
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Genome context
chrX: 18281872-18281957 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from bta-mir-450b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-450b

Accession MIMAT0024576
Description Bos taurus bta-miR-450b mature miRNA
Sequence 9 - UUUUGCAAUAUGUUCCUGAAUA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111