Stem-loop bta-mir-450b

Accession

MI0021121

Description

Bos taurus bta-mir-450b precursor miRNA mir-450

Gene
family

RF00708; mir-450

Literature search

10 open access papers mention bta-mir-450b
(19 sentences)

Sequence

532693 reads, 272.0 reads per million, 315 experiments

aaaauuauUUUUGCAAUAUGUUCCUGAAUAuuuaauauaaguaUAUUGGGAACAUUUUGCAUCCAuaguuuuguaucaguauuuag
((((((((...(((((.(((((((((((((((((...))))))).)))))))))).)))))...))))))))..............

Structure

--------------        UUU     U          -       a 
              aaaauuau   UGCAA AUGUUCCUGA AUAuuua  
              ||||||||   ||||| |||||||||| ||||||| u
              uuuugauA   ACGUU UACAAGGGUU Uaugaau  
gauuuaugacuaug        CCU     U          A       a 

Annotation confidence High

Genome context

X: 18236206-18236291 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-450b

Mature bta-miR-450b-5p

• Accession: MIMAT0024576
• Description: Bos taurus bta-miR-450b-5p mature miRNA
• Sequence: 9 - UUUUGCAAUAUGUUCCUGAAUA - 30
• Evidence: experimental ; Illumina [1]

Mature bta-miR-450b-3p

• Accession: MIMAT0050974
• Description: Bos taurus bta-miR-450b-3p mature miRNA
• Sequence: 44 - UAUUGGGAACAUUUUGCAUCCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111