Stem-loop bta-mir-2284y-1

Accession

MI0021125

Description

Bos taurus bta-mir-2284y-1 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284y-1
(33 sentences)

Sequence

5346 reads, 296 reads per million, 67 experiments

aauaaccccuguuaaggccugcagaacuugcuugaucuauuggguuggccaAAAAGUUCGUUCGGGUUUUUCcuuagucccaaacuaaguuuuuggccaacccaauacaaucuguugggcuucc
..............(((((((((((..(((.......((((((((((((((((((.((.(((.(((............))).))).)).))))))))))))))))))))))))).)))))))..

Structure

aauaaccccuguua       -    ac   cuugauc                  G  C   C   UUUUU 
              aggccug caga  uug       uauuggguuggccaAAAA UU GUU GGG     C
              ||||||| ||||  |||       |||||||||||||||||| || ||| |||      
              uucgggu gucu  aac       auaacccaaccgguuuuu aa caa ccc     c
------------cc       u    --   -------                  g  u   a   ugauu 

Annotation confidence Not enough data

Genome context

chr11: 73372788-73372911 [+]

Mature bta-miR-2284y

• Accession: MIMAT0024579
• Description: Bos taurus bta-miR-2284y mature miRNA
• Sequence: 52 - AAAAGUUCGUUCGGGUUUUUC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111