Stem-loop bta-mir-6119

Accession

MI0021137

Description

Bos taurus bta-mir-6119 precursor miRNA

Literature search

2 open access papers mention bta-mir-6119
(2 sentences)

Sequence

52662 reads, 609 reads per million, 75 experiments

auuuugAGAGGUAAAAAAUUGAUUUGACUaguucuuuaacacaucuaGCAAAUCAUUUUUUACUCUCCAAaaagaac
.(((((.((((((((((((.((((((.((((.............))))))))))))))))))).)))))))).....

Structure

----a     A   -         U      A    uucuu 
     uuuug GAG GUAAAAAAU GAUUUG CUag     u
     ||||| ||| ||||||||| |||||| ||||     a
     aaAAC CUC CAUUUUUUA CUAAAC Gauc     a
caaga     -   U         -      -    uacac 

Annotation confidence High

Genome context

chrX: 4014633-4014709 [-]

Mature bta-miR-6119-5p

• Accession: MIMAT0024588
• Description: Bos taurus bta-miR-6119-5p mature miRNA
• Sequence: 7 - AGAGGUAAAAAAUUGAUUUGACU - 29
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-6119-3p

• Accession: MIMAT0024589
• Description: Bos taurus bta-miR-6119-3p mature miRNA
• Sequence: 48 - GCAAAUCAUUUUUUACUCUCCAA - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111