Stem-loop lus-MIR167a

Accession

MI0021144

Description

Linum usitatissimum lus-MIR167a precursor miRNA

Literature search

3 open access papers mention lus-MIR167a
(5 sentences)

Sequence

cgugcgccacuacagcaguUGAAGCUGCCAGCAUGAUCUCaacuuuugcucucccucagagcgcaaagaugaaagaucaucuggcaguuucaccuuuuguuggcuccacg
((((.((((..((((.((.((((((((((((.(((((((((.((((((((((.....)))))).)))).)))..)))))))))))))))))).)).))))))))..))))

Structure

    -c    cu    c  u            C      --   a    -      c 
cgug  gcca  acag ag UGAAGCUGCCAG AUGAUC  UCa cuuu ugcucu c
||||  ||||  |||| || |||||||||||| ||||||  ||| |||| |||||| c
gcac  cggu  uguu uc acuuugacgguc uacuag  agu gaaa gcgaga u
    cu    --    u  c            -      aa   a    c      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167a

• Accession: MIMAT0027124
• Description: Linum usitatissimum lus-miR167a mature miRNA
• Sequence: 20 - UGAAGCUGCCAGCAUGAUCUC - 40
• Evidence: experimental ; qRT-PCR [1]

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161