Stem-loop lus-MIR164c

Accession

MI0021162

Description

Linum usitatissimum lus-MIR164c precursor miRNA

Literature search

2 open access papers mention lus-MIR164c
(3 sentences)

Sequence

acaggugggcgugagcaugaUGGAGAAGCAGGGCACGUGCAuuacuaacucguggguuuugcuccggaucgaguuagugguucaugugcccaucuuccccaucgugaaaccguugcacuuuacucugu
..(((((((((....((((((((.((((..(((((((((.((((((((((((((((......))))...)))))))))))).)))))))))..)))).))))))))....)))).)))))........

Structure

------ac     -    ugag        A    CA         C            ---    uu 
        aggug ggcg    caugaUGG GAAG  GGGCACGUG Auuacuaacucg   uggg  u
        ||||| ||||    |||||||| ||||  ||||||||| ||||||||||||   ||||   
        uucac uugc    gugcuacc cuuc  cccguguac uggugauugagc   gccu  u
ugucucau     g    caaa        c    ua         u            uag    cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR164c

• Accession: MIMAT0027142
• Description: Linum usitatissimum lus-miR164c mature miRNA
• Sequence: 21 - UGGAGAAGCAGGGCACGUGCA - 41
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161