Stem-loop lus-MIR399d

Accession

MI0021175

Description

Linum usitatissimum lus-MIR399d precursor miRNA

Literature search

1 open access papers mention lus-MIR399d
(18 sentences)

Sequence

gagcucugugugguugaggaauaacagggcaguccuccuuuggcggacugaaaucaugcuaauuggagaaaucaugcaugcaauacccuucugcuuUGCCAAAGGAGAAUUGCCCUGccauuucccucccaccaaaauccuc
......((.((((..(.((((...(((((((((.((((((((((((((.(((..(((((................)))))........))).).))))))))))))).)))))))))....)))))..))))))........

Structure

--gagcuc  u    uu a    -uaa         c             - u   ------au     uaauugg 
        ug gugg  g ggaa    cagggcagu cuccuuuggcgga c gaa        caugc       a
        || ||||  | ||||    ||||||||| ||||||||||||| | |||        |||||        
        ac cacc  c ccuu    GUCCCGUUA GAGGAAACCGUuu g cuu        guacg       g
cuccuaaa  -    cu -    uacc         A             c u   cccauaac     uacuaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR399d

• Accession: MIMAT0027155
• Description: Linum usitatissimum lus-miR399d mature miRNA
• Sequence: 97 - UGCCAAAGGAGAAUUGCCCUG - 117
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161