Stem-loop lus-MIR167d

Accession

MI0021179

Description

Linum usitatissimum lus-MIR167d precursor miRNA

Literature search

3 open access papers mention lus-MIR167d
(5 sentences)

Sequence

cguggagcaccagcaguUGAAGCUGCCAGCAUGAUCUAaccuuccuuugcauauauauguacaugugcaugaucgaucaucaaaguagguaagaggaggaucgauaaggaaggucugagaucaugugacaguuucaccuguugaugcccuucacg
(((((((((.((((((.((((((((...(((((((((.((((((((((((((((........)))))))..(((((((.((..............)).))))))))))))))))...)))))))))..)))))))).)))))).)))..))))))

Structure

      --   c      u        CCA         --A         ugcauauauauguacaugugcaug       a  aaagua 
cgugga  gca cagcag UGAAGCUG   GCAUGAUCU   accuuccuu                        aucgauc uc      g
||||||  ||| |||||| ||||||||   |||||||||   |||||||||                        ||||||| ||       
gcacuu  cgu guuguc acuuugac   uguacuaga   uggaaggaa                        uagcuag ag      g
      cc   a      c        -ag         guc         ------------------------       g  gagaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR167d

• Accession: MIMAT0027159
• Description: Linum usitatissimum lus-miR167d mature miRNA
• Sequence: 18 - UGAAGCUGCCAGCAUGAUCUA - 38
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161