Stem-loop lus-MIR156f

Accession

MI0021206

Description

Linum usitatissimum lus-MIR156f precursor miRNA

Literature search

3 open access papers mention lus-MIR156f
(7 sentences)

Sequence

ggguugagagcucuuuugggggauguugUUGACAGAAGAUAGAGAGCACagaugaugggauacaauugauaguauacauaucucacuuccuuugugcucucuaugcuucugucaucaucuuuucgagcggccuccucgaucc
((((((((.(((.(((.((((((((....(((((((((((((((((((((((.(((((((((................)))))))..)).)))))))))))))).))))))))).)))))))).))).)))...))))))))

Structure

        --a   c   u        uugU         -              u  --       caauuga 
ggguugag   gcu uuu gggggaug    UGACAGAAG AUAGAGAGCACaga ga  ugggaua       u
||||||||   ||| ||| ||||||||    ||||||||| |||||||||||||| ||  |||||||        
ccuagcuc   cgg gag uuuucuac    acugucuuc uaucucucguguuu cu  acucuau       a
        cuc   c   c        ---u         g              c  uc       acauaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR156f

• Accession: MIMAT0027186
• Description: Linum usitatissimum lus-miR156f mature miRNA
• Sequence: 29 - UUGACAGAAGAUAGAGAGCAC - 49
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161