Stem-loop lus-MIR169g

Accession

MI0021216

Description

Linum usitatissimum lus-MIR169g precursor miRNA

Literature search

2 open access papers mention lus-MIR169g
(12 sentences)

Sequence

gccgucaauguaaaagggagaaauguaaugugCAGCCAAGGAUGACUUGCCGAucgacccgcgaacccaauuugcuccgggcuuaucgaucgauugauauugauggaucggcaaguugguccuuggcuacaucuucuuuuuucccuucaucucauccuuggc
((((...(((...((((((((((.(.((.(((.((((((((((.(((((((((((..((((.((...........)))))).......((((((....)))))).)))))))))))..)))))))))).))).))).)))))))))).....)))...))))

Structure

    uca   --uaa          u u  u   C          -G           ----------------------ga    c  accc 
gccg   aug     aagggagaaa g aa gug AGCCAAGGAU  ACUUGCCGAuc                        cccg ga    a
||||   |||     |||||||||| | || ||| ||||||||||  |||||||||||                        |||| ||    a
cggu   uac     uucccuuuuu c uu uac ucgguuccug  ugaacggcuag                        gggc cu    u
    ucc   ucuac          u -  c   a          gu           guaguuauaguuagcuagcuauuc    -  cguu 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR169g

• Accession: MIMAT0027196
• Description: Linum usitatissimum lus-miR169g mature miRNA
• Sequence: 33 - CAGCCAAGGAUGACUUGCCGA - 53
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161