Stem-loop lus-MIR160h

Accession

MI0021231

Description

Linum usitatissimum lus-MIR160h precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

2 open access papers mention lus-MIR160h
(6 sentences)

Sequence

gguagagggugaauuugagaauaUGCCUGGCUCCCUGUAUGCCAcaggcaaacucccaaucccaaauuguugguuuucuaucagauugguuguugcugguggcguacauggagucaagcauguaguauaugcgcccucuuuc
...((((((((......(..((((((.(((((((.((((((((((.(((((.(..((((((((((....))))..........))))))..)))))).)))))))))).))))))).))))))..).....))))))))...

Structure

ggu        aauuug ga      C       C          a     a uc      ----------    a 
   agagggug      a  auaUGC UGGCUCC UGUAUGCCAc ggcaa c  ccaauc          ccaa u
   ||||||||      |  |||||| ||||||| |||||||||| ||||| |  ||||||          ||||  
   ucucccgc      u  uguacg acugagg acaugcggug ucguu g  gguuag          gguu u
cuu        -guaua ga      a       u          g     - uu      acuaucuuuu    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR160h

• Accession: MIMAT0027211
• Description: Linum usitatissimum lus-miR160h mature miRNA
• Sequence: 24 - UGCCUGGCUCCCUGUAUGCCA - 44
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161