Stem-loop lus-MIR828a

Accession

MI0021240

Description

Linum usitatissimum lus-MIR828a precursor miRNA

Sequence

guuguuaguagaugaaucaccucuugugguaaacguuUCUUGCUCAAAUGAGUGUUCCAaaaccagcaagcgauggagcaguucuggguucaaauacuccaucuguuguuugcaucugagaugcucauuugggcaagcaguguuucacaaagaggugucuguugauuuc
...(((((((((.....((((((((((((..((((((.((((((((((((((((((.((......((((((((((((.......(((((......)).)))))))))))))))...)).)))))))))))))))))).)))))))))).)))))))))))))))))...

Structure

guu         ugaau        -    ua      U                  C  aaacca            gcaguuc   -  uc 
   guuaguaga     caccucuu gugg  aacguu CUUGCUCAAAUGAGUGUU CA      gcaagcgaugga       ugg gu  a
   |||||||||     |||||||| ||||  |||||| |||||||||||||||||| ||      ||||||||||||       ||| ||   
   uaguugucu     guggagaa cacu  uuguga gaacggguuuacucguag gu      cguuuguugucu       acc ca  a
cuu         -----        a    --      c                  a  ---cua            -------   u  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature lus-miR828a

• Accession: MIMAT0027220
• Description: Linum usitatissimum lus-miR828a mature miRNA
• Sequence: 38 - UCUUGCUCAAAUGAGUGUUCCA - 59
• Evidence: not_experimental

References

1. PubMed ID: 23291876
   Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes
   "Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY"
   "Planta (2013) 237:1149-1161