Stem-loop ptr-mir-6128

Accession

MI0021262

Description

Pan troglodytes ptr-mir-6128 precursor miRNA

Sequence

aagaagcuuguagauuuuucucccuuacuaucuagaauuauaggacuucaguccaugauuuggaaaaauuACUGGAAUUGGAGUCAAAAauaauuugaaaauuaggaau
...........(((....))).(((.........(((((((..((((((((((((((((((....)))))).))).)))))))))....))))))).......)))...

Structure

aagaagcuuguagauuuuucuc   uacuaucua       --ag         -   -      g 
                      ccu         gaauuau    gacuucagu cca ugauuu g
                      |||         |||||||    ||||||||| ||| ||||||  
                      gga         uuuaaua    CUGAGGUUA GGU Auuaaa a
-------------------uaa   --uuaaaag       AAAA         A   C      a 

Annotation confidence Not enough data

Genome context

chr11: 56479900-56480008 [+]

Mature ptr-miR-6128

• Accession: MIMAT0024601
• Description: Pan troglodytes ptr-miR-6128 mature miRNA
• Sequence: 71 - ACUGGAAUUGGAGUCAAAA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564