Stem-loop ptr-mir-6130

Accession

MI0021265

Description

Pan troglodytes ptr-mir-6130 precursor miRNA

Sequence

caaugaauguggaaaugcaggcaucccuucuauauacugauuuaauuuuccuuggauuuauaugcaguacUGAGGGAGUGGAUUGUAUGguaguucuauuuuuacauuu
....(((((((((((((((.(((((((((((.(((((((....(((((.....)))))......))))).)).))))).))).))).)).......)))))))))))))

Structure

caau             -------  g   -   -     a  -     --auuu     u 
    gaauguggaaaug       ca gca ucc cuucu ua uacug      aauuu c
    |||||||||||||       || ||| ||| ||||| || |||||      ||||| c
    uuuacauuuuuau       GU UGU AGG GAGGG GU augac      uuagg u
----             cuugaug  A   U   U     A  c     guauau     u 

Annotation confidence Not enough data

Genome context

chr21: 9576829-9576937 [+]

Mature ptr-miR-6130

• Accession: MIMAT0024604
• Description: Pan troglodytes ptr-miR-6130 mature miRNA
• Sequence: 71 - UGAGGGAGUGGAUUGUAUG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564