Stem-loop ptr-mir-6132

Accession

MI0021267

Description

Pan troglodytes ptr-mir-6132 precursor miRNA

Sequence

ugcuauugucuuacugcuacAGCAGGGCUGGGGAUUGCAguauccgcuguugcugcugcugccaguccugccccugcugcuaccuaguccagccucacugcaucccaga
(((...((.......((((((((((((...((((((((((((.(.((....)).).))))).)))))))..)))))))).....)))).......))..))).......

Structure

-------   uau  ucuuacu    -----        CUG       -     u c  u 
       ugc   ug       gcua     cAGCAGGG   GGGAUUG CAgua c gc g
       |||   ||       ||||     ||||||||   ||||||| ||||| | ||  
       acg   ac       ugau     gucguccc   uccugac gucgu g cg u
agacccu   -uc  uccgacc    ccauc        -cg       c     c u  u 

Annotation confidence Not enough data

Genome context

chr7: 121509994-121510102 [+]

Mature ptr-miR-6132

• Accession: MIMAT0024606
• Description: Pan troglodytes ptr-miR-6132 mature miRNA
• Sequence: 21 - AGCAGGGCUGGGGAUUGCA - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564