miRBase entry: mml-mir-3154

Stem-loop mml-mir-3154


Accession
MI0021288
Description
Macaca mulatta mml-mir-3154 precursor miRNA


Sequence

1300 reads, 1.0 reads per million, 53 experiments
ggccggcccccuccucaggccccuccuucucagccccagcucccgcucaccccugccacgucaaaggaggCAGAAGGGGAGUUGGGAGCAGAgaggggaccacgggcug
((((((((.........))))..((((((((.((((((((((((.((.....(((((.(......)..))))).)))))))))))).)).))))))))......)))).

Structure
-    ggcccccuccucaggcccc        a  -          g  caccc     -a gu 
 ggcc                   uccuucuc gc cccagcuccc cu     cugcc  c  c
 ||||                   |||||||| || |||||||||| ||     |||||  |   
 ucgg                   ggggagAG CG GGGUUGAGGG GA     GACgg  g  a
g    -------------gcacca        A  A          -  ----A     ag aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
15: 12348076-12348184 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-3154
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-3154-3p

Accession MIMAT0024627
Description Macaca mulatta mml-miR-3154-3p mature miRNA
Sequence 71 - CAGAAGGGGAGUUGGGAGCAGA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564