We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
Want the script? Email us or visit Downloads or something.
Ca a c cg
guuuauuuuuGAGUAAGUUGGUCAAUUGG aauagaau uuga acgcagg a
||||||||||||||||||||||||||||| |||||||| |||| |||||||
caaauaaaaacucauuuaaucaguuaacc uuaucuua gauu ugugucu a
ag c a ug