Stem-loop nta-MIR156b

Accession

MI0021320

Description

Nicotiana tabacum nta-MIR156b precursor miRNA

Literature search

8 open access papers mention nta-MIR156b
(25 sentences)

Sequence

668249 reads, 87354.0 reads per million, 46 experiments

uuaaaggaggUGACAGAAGAGAGUGAGCACccaugguguuuucuuacaugagauauauauucaugcuugaagcuaugcguGCUCACUCUCUAUCUGUCACCcacuguuuuc
....((..((((((((((((((((((((((.((((((...(((...((((((.......))))))...))))))))).))))))))))))).)))))))))..))......

Structure

--uuaa  ga         -             c      guu   uua      au 
      ag  ggUGACAGA AGAGAGUGAGCAC cauggu   uuc   caugag  a
      ||  ||||||||| ||||||||||||| ||||||   |||   ||||||  u
      uc  CCACUGUCU UCUCUCACUCGug guaucg   aag   guacuu  a
cuuuug  ac         A             c      ---   uuc      au 

Annotation confidence High

Genome context

Unknown

Mature nta-miR156b-5p

• Accession: MIMAT0024630
• Description: Nicotiana tabacum nta-miR156b-5p mature miRNA
• Sequence: 11 - UGACAGAAGAGAGUGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature nta-miR156b-3p

• Accession: MIMAT0058027
• Description: Nicotiana tabacum nta-miR156b-3p mature miRNA
• Sequence: 81 - GCUCACUCUCUAUCUGUCACC - 101
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28