Stem-loop nta-MIR156e

Accession

MI0021323

Description

Nicotiana tabacum nta-MIR156e precursor miRNA

Literature search

7 open access papers mention nta-MIR156e
(24 sentences)

Sequence

865082 reads, 138276.0 reads per million, 46 experiments

uaaagggaggUGACAGAAGAGAGUGAGCACacaugguauuuucuugcauaugauaugcuugaagcuaugcguGCUCACUGCUCUAUCUGUCACCccccaccacu
....(((.((((((((((((((((((((((.((((((...(((..(((((...)))))..))))))))).))))))))).)))).))))))))).)))......

Structure

--uaaa   a         -    -         a      auu   uu     u 
      ggg ggUGACAGA AGAG AGUGAGCAC cauggu   uuc  gcaua  
      ||| ||||||||| |||| ||||||||| ||||||   |||  ||||| g
      ccc CCACUGUCU UCUC UCACUCGug guaucg   aag  cguau  
ucacca   c         A    G         c      ---   uu     a 

Annotation confidence High

Genome context

Unknown

Mature nta-miR156e-5p

• Accession: MIMAT0024633
• Description: Nicotiana tabacum nta-miR156e-5p mature miRNA
• Sequence: 11 - UGACAGAAGAGAGUGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature nta-miR156e-3p

• Accession: MIMAT0058030
• Description: Nicotiana tabacum nta-miR156e-3p mature miRNA
• Sequence: 73 - GCUCACUGCUCUAUCUGUCACC - 94
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28