Stem-loop nta-MIR156f

Accession

MI0021324

Description

Nicotiana tabacum nta-MIR156f precursor miRNA

Literature search

8 open access papers mention nta-MIR156f
(26 sentences)

Sequence

20611 reads, 3283.0 reads per million, 40 experiments

uuaaaggaggUGACAGAAGAGAAUGAGCACacaugguguuuucuuacaugagauauauauauucaugcuugaaacuaugcguGCUCACUCUCUAUCUGUCACCcacuuucuuu
..((((..((((((((((((((.(((((((.((((((...(((...((((((.........))))))...))))))))).))))))).))))).)))))))))..))))....

Structure

--uu    ga         -     A       a      guu   uua      aua 
    aaag  ggUGACAGA AGAGA UGAGCAC cauggu   uuc   caugag   u
    ||||  ||||||||| ||||| ||||||| ||||||   |||   ||||||   a
    uuuc  CCACUGUCU UCUCU ACUCGug guauca   aag   guacuu   u
uuuc    ac         A     C       c      ---   uuc      aua 

Annotation confidence High

Genome context

Unknown

Mature nta-miR156f-5p

• Accession: MIMAT0024634
• Description: Nicotiana tabacum nta-miR156f-5p mature miRNA
• Sequence: 11 - UGACAGAAGAGAAUGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature nta-miR156f-3p

• Accession: MIMAT0058031
• Description: Nicotiana tabacum nta-miR156f-3p mature miRNA
• Sequence: 83 - GCUCACUCUCUAUCUGUCACC - 103
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28