Stem-loop nta-MIR156h

Accession

MI0021326

Description

Nicotiana tabacum nta-MIR156h precursor miRNA

Literature search

7 open access papers mention nta-MIR156h
(24 sentences)

Sequence

6327389 reads, 27238.0 reads per million, 46 experiments

ggagaugcuguUGACAGAAGAUAGAGAGCACagaugaugauaagaugcuaauuggaagcuuucugcaccuuaauccuuuguGCUCUCUAGUCUUCUGUCAUCauccucagcc
.(((....((.(((((((((((((((((((((((.(((..((((.(((..(..(....)..)..))).))))))).)))))))))))).))))))))))).))..)))....

Structure

---g   augc  u           -            u   ga    a   ua uu g 
    gag    ug UGACAGAAGAU AGAGAGCACaga gau  uaag ugc  a  g a
    |||    || ||||||||||| |||||||||||| |||  |||| |||  |  |  
    cuc    aC ACUGUCUUCUG UCUCUCGuguuu cua  auuc acg  u  c a
ccga   --cu  U           A            c   --    c   uc uu g 

Annotation confidence High

Genome context

Unknown

Mature nta-miR156h-5p

• Accession: MIMAT0024636
• Description: Nicotiana tabacum nta-miR156h-5p mature miRNA
• Sequence: 12 - UGACAGAAGAUAGAGAGCAC - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR156h-3p

• Accession: MIMAT0058033
• Description: Nicotiana tabacum nta-miR156h-3p mature miRNA
• Sequence: 82 - GCUCUCUAGUCUUCUGUCAUC - 102
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28