Stem-loop nta-MIR156i

Accession

MI0021327

Description

Nicotiana tabacum nta-MIR156i precursor miRNA

Literature search

7 open access papers mention nta-MIR156i
(24 sentences)

Sequence

13471913 reads, 60958.0 reads per million, 46 experiments

ugauaauuguUGACAGAAGAUAGAGAGCACugaugaugauaugcuaauuaaauuugugcagcaaaagcaucucaauucauuuguGCUCUCUAUGCUUCUGUCAUCaccuucagcca
(((....((.((((((((((((((((((((.((((((((.(((((.......(((((...)))))))))).)))..))))).))))))))))).))))))))).))...)))....

Structure

----   uaau  u         -           u     --   u     aauuaaa     g 
    uga    ug UGACAGAAG AUAGAGAGCAC gauga  uga augcu       uuugu  
    |||    || ||||||||| ||||||||||| |||||  ||| |||||       ||||| c
    acu    aC ACUGUCUUC UAUCUCUCGug uuacu  acu uacga       aaacg  
accg   -ucc  U         G           u     ua   c     -------     a 

Annotation confidence High

Genome context

Unknown

Mature nta-miR156i-5p

• Accession: MIMAT0024637
• Description: Nicotiana tabacum nta-miR156i-5p mature miRNA
• Sequence: 11 - UGACAGAAGAUAGAGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature nta-miR156i-3p

• Accession: MIMAT0058034
• Description: Nicotiana tabacum nta-miR156i-3p mature miRNA
• Sequence: 85 - GCUCUCUAUGCUUCUGUCAUC - 105
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28