Stem-loop nta-MIR164b

Accession

MI0021337

Description

Nicotiana tabacum nta-MIR164b precursor miRNA

Literature search

2 open access papers mention nta-MIR164b
(6 sentences)

Sequence

gugaucaagaUGGAGAAGCAGGGCACGUGCAuuacuaacucaugcacaggaauugucagugaaaauuuuuauggcauucaucugacaucauaauucauaguaccauuacuguacuuccuagcguaguggaaaauaaugguuugguacuucacauguauguguuuccguuuccguugaguuaguucuucaugugccugucuuccccaucaugaucacuc
(((((((.(((((.((((..(((((((((....(((((((((((....((((.((((((((((.............)))).))))))...........(((((((..(((((..((((.........))))....))))).))))))).((((....)))).)))).....)).)))))))))....)))))))))..)))).))))).)))))))..

Structure

--       a     A    CA         CAuu         -  -caca    uugucagugaaaauuuuuauggcauucaucugacaucauaauucau       uu     --ac    uag 
  gugauca gaUGG GAAG  GGGCACGUG    acuaacuca ug     ggaa                                              aguacca  acugu    uucc   c
  ||||||| ||||| ||||  |||||||||    ||||||||| ||     ||||                                              |||||||  |||||    ||||   g
  cacuagu cuacc cuuc  uccguguac    ugauugagu gc     ccuu                                              ucauggu  uggua    aagg   u
cu       a     c    ug         uucu         u  cuuug    --------------------------------uguguauguacacu       -u     auaa    uga 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR164b

• Accession: MIMAT0024647
• Description: Nicotiana tabacum nta-miR164b mature miRNA
• Sequence: 11 - UGGAGAAGCAGGGCACGUGCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28