Stem-loop nta-MIR166g

Accession

MI0021345

Description

Nicotiana tabacum nta-MIR166g precursor miRNA

Literature search

4 open access papers mention nta-MIR166g
(8 sentences)

Sequence

8875914 reads, 518893.0 reads per million, 46 experiments

uuuguuaaggAGAAUGUUGUCUGGUUCGUGAccaaucuguaaacaguaauuagcuaacugucaacauucaucacuugaaugaucUCGGACCAGGCUUCAUUCCCCUcaacucaa
...(((.(((.(((((..((((((((((.((...........(((((.........)))))...((((((.....)))))).)).))))))))))..))))).))).)))....

Structure

-uuu   a   A     UU          U  ccaaucuguaaacaguaauuagcuaacugucaa      u 
    guu agg GAAUG  GUCUGGUUCG GA                                 cauuca c
    ||| ||| |||||  |||||||||| ||                                 |||||| a
    caa UCC CUUAC  CGGACCAGGC cu                                 guaagu c
aacu   c   C     UU          U  --------------------------------a      u 

Annotation confidence High

Genome context

Unknown

Mature nta-miR166g-5p

• Accession: MIMAT0058052
• Description: Nicotiana tabacum nta-miR166g-5p mature miRNA
• Sequence: 11 - AGAAUGUUGUCUGGUUCGUGA - 31
• Evidence: experimental ; unknown

Mature nta-miR166g-3p

• Accession: MIMAT0024655
• Description: Nicotiana tabacum nta-miR166g-3p mature miRNA
• Sequence: 85 - UCGGACCAGGCUUCAUUCCCCU - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28