Stem-loop nta-MIR167d

Accession

MI0021350

Description

Nicotiana tabacum nta-MIR167d precursor miRNA

Literature search

4 open access papers mention nta-MIR167d
(12 sentences)

Sequence

496613 reads, 30455.0 reads per million, 43 experiments

cacuaucaguUGAAGCUGCCAGCAUGAUCUAaacuuaccucuuguaauaauuaaguuugagggaagauuaGAUCAUGUGGUAGCUUCACCcguuaguug
.((((.(.(.(((((((((((.((((((((((.((..((((.................))))..)).))))))))))))))))))))).).).))))..

Structure

-c    u a u           G          a  ua    uuguaau 
  acua c g UGAAGCUGCCA CAUGAUCUAa cu  ccuc       a
  |||| | | ||||||||||| |||||||||| ||  ||||       a
  ugau g C ACUUCGAUGGU GUACUAGauu ga  ggag       u
gu    u c C           -          a  ag    uuugaau 

Annotation confidence Medium

Genome context

Unknown

Mature nta-miR167d-5p

• Accession: MIMAT0024660
• Description: Nicotiana tabacum nta-miR167d-5p mature miRNA
• Sequence: 11 - UGAAGCUGCCAGCAUGAUCUA - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR167d-3p

• Accession: MIMAT0058057
• Description: Nicotiana tabacum nta-miR167d-3p mature miRNA
• Sequence: 71 - GAUCAUGUGGUAGCUUCACC - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28