Stem-loop nta-MIR168b

Accession

MI0021353

Description

Nicotiana tabacum nta-MIR168b precursor miRNA

Literature search

3 open access papers mention nta-MIR168b
(3 sentences)

Sequence

ugucucuaauUCGCUUGGUGCAGGUCGGGACuaauucgccggcggcaaucacgucggcggugauuauucuacgaagcuuagauguacgaaguuaucaacaauguuccuuugcggcgaaauuugggucccgccuugcaucaacugaauuggagacugc
.((((((((((((.((((((((((.(((((((...(((((((((.......)))))))))((((..((((((...........))).)))...)))).(((..(((((....)).)))..)))))))))).)))))))))).))))))))))))...

Structure

--u            C          U       ------------------------------------------------------------aau         gc 
   gucucuaauUCG UUGGUGCAGG CGGGACu                                                               ucgccggcg  a
   |||||||||||| |||||||||| |||||||                                                               |||||||||  a
   cagagguuaagu aacuacguuc gcccugg                                                               ggcggcugc  u
cgu            c          c       guuuaaagcggcguuuccuuguaacaacuauugaagcauguagauucgaagcaucuuauuagu         ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR168b

• Accession: MIMAT0024663
• Description: Nicotiana tabacum nta-miR168b mature miRNA
• Sequence: 11 - UCGCUUGGUGCAGGUCGGGAC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28