Stem-loop nta-MIR169h

Accession

MI0021364

Description

Nicotiana tabacum nta-MIR169h precursor miRNA

Literature search

4 open access papers mention nta-MIR169h
(15 sentences)

Sequence

3193 reads, 301.0 reads per million, 33 experiments

gaguggauugCAGCCAAGGAUGACUUGCCGAgauguuguagcuaaugcaacgacuuaucuGCAGGUCGUCCUUGGCUACAUuuagcucuuu
((((.((.((.(((((((((((((((((.((...(((((.((....)).)))))...)).))))))))))))))))).)).)).))))...

Structure

---    g  u  C                 C  gau     a  u 
   gagu ga ug AGCCAAGGAUGACUUGC GA   guugu gc a
   |||| || || ||||||||||||||||| ||   ||||| ||  
   cucg uu AC UCGGUUCCUGCUGGACG cu   cagca cg a
uuu    a  U  A                 u  auu     a  u 

Annotation confidence High

Genome context

Unknown

Mature nta-miR169h-5p

• Accession: MIMAT0024674
• Description: Nicotiana tabacum nta-miR169h-5p mature miRNA
• Sequence: 11 - CAGCCAAGGAUGACUUGCCGA - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR169h-3p

• Accession: MIMAT0058071
• Description: Nicotiana tabacum nta-miR169h-3p mature miRNA
• Sequence: 61 - GCAGGUCGUCCUUGGCUACAU - 81
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28