Stem-loop nta-MIR171b

Accession

MI0021377

Description

Nicotiana tabacum nta-MIR171b precursor miRNA

Literature search

5 open access papers mention nta-MIR171b
(8 sentences)

Sequence

uaaaggaagcgauguuggugagguucaauccgaagacguguuuacguuuuguuuucguaaaaaacgaucucagaUUGAGCCGCGCCAAUAUCACUuccuauauau
...((((((.((((((((((.(((((((((.((.(((((.((((((.........))))))..))).)))).))))))))).)))))))))).))))))......

Structure

---uaa      c          a         c  a  -   -g      uuu 
      aggaag gauguuggug gguucaauc ga ga cgu  uuuacg   u
      |||||| |||||||||| ||||||||| || || |||  ||||||   g
      uccuUC CUAUAACCGC CCGAGUUag cu cu gca  aaaugc   u
uauaua      A          G         a  -  a   aa      uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR171b

• Accession: MIMAT0024687
• Description: Nicotiana tabacum nta-miR171b mature miRNA
• Sequence: 75 - UUGAGCCGCGCCAAUAUCACU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28