Stem-loop nta-MIR395a

Accession

MI0021395

Description

Nicotiana tabacum nta-MIR395a precursor miRNA

Literature search

5 open access papers mention nta-MIR395a
(46 sentences)

Sequence

716 reads, 79.0 reads per million, 30 experiments

uuccccuugaGUUCUCCUGAUCACUUCAUUGggacuugaaaaaugcccuuuaaauugaaaugguauuaauuauuaaugccuaCUGAAGUGUUUGGGGGAACUCuaggagccac
....(((.((((((((((((.(((((((.((((..((((..((((((.(((......))).)))))).....))))..)))).))))))).)))))))))))).)))......

Structure

--uucc   u            U       U    ac    ---aa      c   aa 
      ccu gaGUUCUCCUGA CACUUCA UGgg  uuga     aaugcc uuu  a
      ||| |||||||||||| ||||||| ||||  ||||     |||||| |||   
      gga CUCAAGGGGGUU GUGAAGU aucc  aauu     uuaugg aaa  u
caccga   u            U       C    gu    auuaa      u   gu 

Annotation confidence High

Genome context

Unknown

Mature nta-miR395a-5p

• Accession: MIMAT0058101
• Description: Nicotiana tabacum nta-miR395a-5p mature miRNA
• Sequence: 11 - GUUCUCCUGAUCACUUCAUUG - 31
• Evidence: experimental ; unknown

Mature nta-miR395a-3p

• Accession: MIMAT0024705
• Description: Nicotiana tabacum nta-miR395a-3p mature miRNA
• Sequence: 83 - CUGAAGUGUUUGGGGGAACUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28