Stem-loop nta-MIR395b

Accession

MI0021396

Description

Nicotiana tabacum nta-MIR395b precursor miRNA

Literature search

5 open access papers mention nta-MIR395b
(49 sentences)

Sequence

715 reads, 76.0 reads per million, 31 experiments

uuccccuugaGUUCUCCUGAUCACUUCAUUGggacuugaaaaaugcccuuaaauugaaaugguauuaauuauuaaugccuaCUGAAGUGUUUGGGGGAACUCuaggagccac
....(((.((((((((((((.(((((((.((((..((((..((((((.((.......)).)))))).....))))..)))).))))))).)))))))))))).)))......

Structure

--uucc   u            U       U    ac    ---aa      c  aa 
      ccu gaGUUCUCCUGA CACUUCA UGgg  uuga     aaugcc uu  a
      ||| |||||||||||| ||||||| ||||  ||||     |||||| ||  u
      gga CUCAAGGGGGUU GUGAAGU aucc  aauu     uuaugg aa  u
caccga   u            U       C    gu    auuaa      u  ag 

Annotation confidence High

Genome context

Unknown

Mature nta-miR395b-5p

• Accession: MIMAT0058102
• Description: Nicotiana tabacum nta-miR395b-5p mature miRNA
• Sequence: 11 - GUUCUCCUGAUCACUUCAUUG - 31
• Evidence: experimental ; unknown

Mature nta-miR395b-3p

• Accession: MIMAT0024706
• Description: Nicotiana tabacum nta-miR395b-3p mature miRNA
• Sequence: 82 - CUGAAGUGUUUGGGGGAACUC - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28