Stem-loop nta-MIR395c

Accession

MI0021397

Description

Nicotiana tabacum nta-MIR395c precursor miRNA

Literature search

5 open access papers mention nta-MIR395c
(46 sentences)

Sequence

664 reads, 78.0 reads per million, 29 experiments

uuccccuagaGUUCUCCUGAUCACUUCAUUGggacuucaaaaaugcccuuaaaauggaaaggguauuaauuauuaaugccuaCUGAAGUGUUUGGGGGAACUCcgggagccac
(((((...((((((((((((.(((((((.((((........(((((((((........)))))))))...........)))).))))))).)))))))))))).)))))....

Structure

----     cua            U       U    ---acuucaaa         aaa 
    uuccc   gaGUUCUCCUGA CACUUCA UGgg           aaugcccuu   a
    |||||   |||||||||||| ||||||| ||||           |||||||||    
    gaggg   CUCAAGGGGGUU GUGAAGU aucc           uuaugggaa   u
cacc     --c            U       C    guaauuauuaa         agg 

Annotation confidence High

Genome context

Unknown

Mature nta-miR395c-5p

• Accession: MIMAT0058103
• Description: Nicotiana tabacum nta-miR395c-5p mature miRNA
• Sequence: 11 - GUUCUCCUGAUCACUUCAUUG - 31
• Evidence: experimental ; unknown

Mature nta-miR395c-3p

• Accession: MIMAT0024707
• Description: Nicotiana tabacum nta-miR395c-3p mature miRNA
• Sequence: 83 - CUGAAGUGUUUGGGGGAACUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28