Stem-loop nta-MIR399d

Accession

MI0021406

Description

Nicotiana tabacum nta-MIR399d precursor miRNA

Literature search

4 open access papers mention nta-MIR399d
(11 sentences)

Sequence

aauagugguagggcuacucucuauuggcaugcacuuaauuauguauagugauuccacuuaaucaucacauauauacuucaguugacaCGCCAAAGGAGAGCUGCCCUGuuacuaucuc
.(((((((((((((..((((((.(((((.((((((.((.(((((((.(((((...........)))))))))))).)).)).)).)).))))).))))))..)))))))))))))...

Structure

--a             ua      a     a  -  -  u  u       a     ucca 
   auagugguagggc  cucucu uuggc ug ca cu aa uauguau gugau    c
   |||||||||||||  |||||| ||||| || || || || ||||||| |||||    u
   uaucauuGUCCCG  GAGAGG AACCG ac gu ga uu auauaua cacua    u
cuc             UC      A     C  a  u  c  c       -     cuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR399d

• Accession: MIMAT0024716
• Description: Nicotiana tabacum nta-miR399d mature miRNA
• Sequence: 88 - CGCCAAAGGAGAGCUGCCCUG - 108
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28