Stem-loop nta-MIR482c

Accession

MI0021417

Description

Nicotiana tabacum nta-MIR482c precursor miRNA

Literature search

1 open access papers mention nta-MIR482c
(3 sentences)

Sequence

88793 reads, 6358.0 reads per million, 42 experiments

gaaaacuaugGGGAUUGGUGGGUUGGAAAGCUuuucccuucugauugauuaaacgcUUUCCAAUUCCACCCAUUCCUAugguuuuuca
(((((((((((((((.(((((((((((((((.(((....((.....))..))).))))))))).)))))).)))))))))))))))..

Structure

--               U      -         U   cccu  u 
  gaaaacuaugGGGAU GGUGGG UUGGAAAGC uuu    uc g
  ||||||||||||||| |||||| ||||||||| |||    || a
  uuuuugguAUCCUUA CCACCU AACCUUUcg aaa    ag u
ac               C      U         c   --uu  u 

Annotation confidence High

Genome context

Unknown

Mature nta-miR482c-5p

• Accession: MIMAT0058123
• Description: Nicotiana tabacum nta-miR482c-5p mature miRNA
• Sequence: 11 - GGGAUUGGUGGGUUGGAAAGCU - 32
• Evidence: experimental ; unknown

Mature nta-miR482c-3p

• Accession: MIMAT0024727
• Description: Nicotiana tabacum nta-miR482c-3p mature miRNA
• Sequence: 57 - UUUCCAAUUCCACCCAUUCCUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28