miRBase entry: nta-MIR6146b

Stem-loop nta-MIR6146b


Accession
MI0021425
Description
Nicotiana tabacum nta-MIR6146b precursor miRNA


Sequence

189318 reads, 8303.0 reads per million, 41 experiments
cucaacggguUUUGUCCAAUGAAAUACUUAUCagacaucaaggguccagaUAAGUGUUCAUUGGACAAAGAUcguuacugu
...(((((.((((((((((((((.((((((((.(((.......)))..)))))))))))))))))))))).))))).....

Structure
--cuc     g              A        -a   au 
     aacgg uUUUGUCCAAUGAA UACUUAUC  gac  c
     ||||| |||||||||||||| ||||||||  |||  a
     uugcU GAAACAGGUUACUU GUGAAUag  cug  a
uguca     A              -        ac   gg 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6146b-5p

Accession MIMAT0024735
Description Nicotiana tabacum nta-miR6146b-5p mature miRNA
Sequence 11 - UUUGUCCAAUGAAAUACUUAUC - 32
Evidence experimental
Illumina [1]

Mature nta-miR6146b-3p

Accession MIMAT0058130
Description Nicotiana tabacum nta-miR6146b-3p mature miRNA
Sequence 51 - UAAGUGUUCAUUGGACAAAGAU - 72
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28