miRBase entry: nta-MIR6148a

Stem-loop nta-MIR6148a


Accession
MI0021427
Description
Nicotiana tabacum nta-MIR6148a precursor miRNA


Sequence

50886 reads, 13946.0 reads per million, 46 experiments
accuagaaccUACGUCGAUCGAUUGUUCUUAacAAGAACAAUUGAUUGACGUugguuuugguuc
..((((((((.(((((((((((((((((((...))))))))))))))))))).))))))))...

Structure
-ac        U                   A 
   cuagaacc ACGUCGAUCGAUUGUUCUU  
   |||||||| ||||||||||||||||||| a
   gguuuugg UGCAGUUAGUUAACAAGAA  
cuu        u                   c 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6148a-5p

Accession MIMAT0024737
Description Nicotiana tabacum nta-miR6148a-5p mature miRNA
Sequence 11 - UACGUCGAUCGAUUGUUCUUA - 31
Evidence experimental
Illumina [1]

Mature nta-miR6148a-3p

Accession MIMAT0058132
Description Nicotiana tabacum nta-miR6148a-3p mature miRNA
Sequence 34 - AAGAACAAUUGAUUGACGU - 52
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28