Stem-loop nta-MIR6148b

Accession

MI0021428

Description

Nicotiana tabacum nta-MIR6148b precursor miRNA

Sequence

5240 reads, 1458.0 reads per million, 37 experiments

acccgaaauuUGUGUUAAUCGUUUGUUCUCAacaAGAACAUUCGAUUAACACCaguuucggcu
..((((((((.((((((((((..((((((.....))))))..)))))))))).))))))))..

Structure

ac        U          UU      C 
  ccgaaauu GUGUUAAUCG  UGUUCU A
  |||||||| ||||||||||  |||||| a
  ggcuuuga CACAAUUAGC  ACAAGA c
uc        C          UU      a 

Annotation confidence Medium

Genome context

Unknown

Mature nta-miR6148b-5p

• Accession: MIMAT0024738
• Description: Nicotiana tabacum nta-miR6148b-5p mature miRNA
• Sequence: 11 - UGUGUUAAUCGUUUGUUCUCA - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR6148b-3p

• Accession: MIMAT0058133
• Description: Nicotiana tabacum nta-miR6148b-3p mature miRNA
• Sequence: 35 - AGAACAUUCGAUUAACACC - 53
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28