Stem-loop nta-MIR6149b

Accession

MI0021430

Description

Nicotiana tabacum nta-MIR6149b precursor miRNA

Literature search

1 open access papers mention nta-MIR6149b
(2 sentences)

Sequence

1540875 reads, 65943.0 reads per million, 46 experiments

augucaaagcUUGAUACGCACCUGAAUCGGCaacuacguacagaccaauacauaugcCGAUCUGGGUUCGUAUCAAACUaugauauac
((((((.((.((((((((.(((((.(((((((..((.(((........))).))))))))).))))).)))))))).)).))))))..

Structure

--      a  c        C     A       ac  c   cag 
  auguca ag UUGAUACG ACCUG AUCGGCa  ua gua   a
  |||||| || |||||||| ||||| |||||||  || |||    
  uauagu UC AACUAUGC UGGGU UAGCcgu  au cau   c
ca      a  A        U     C       --  a   aac 

Annotation confidence High

Genome context

Unknown

Mature nta-miR6149b-5p

• Accession: MIMAT0024740
• Description: Nicotiana tabacum nta-miR6149b-5p mature miRNA
• Sequence: 11 - UUGAUACGCACCUGAAUCGGC - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR6149b-3p

• Accession: MIMAT0058135
• Description: Nicotiana tabacum nta-miR6149b-3p mature miRNA
• Sequence: 58 - CGAUCUGGGUUCGUAUCAAACU - 79
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28