miRBase entry: nta-MIR6150

Stem-loop nta-MIR6150


Accession
MI0021431
Description
Nicotiana tabacum nta-MIR6150 precursor miRNA


Sequence

10265 reads, 517.0 reads per million, 43 experiments
cccugauagcAGAUUUGUUUGAUCGUCUUGGCcaagccaagguauuuaccAAGAUGGAUUUAAGGAAAGGAUauuaucaag
...((((((....(((.((((((((((((((....((....)).....)))))))))..))))).))).....))))))..

Structure
ccc      -cAGA   G     --         -Ccaa  c 
   ugauag     UUU UUUGA  UCGUCUUGG     gc a
   ||||||     ||| |||||  |||||||||     ||  
   acuauu     AAA GAAUU  GGUAGAAcc     ug a
-ga      aUAGG   G     UA         auuua  g 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6150-5p

Accession MIMAT0024741
Description Nicotiana tabacum nta-miR6150-5p mature miRNA
Sequence 11 - AGAUUUGUUUGAUCGUCUUGGC - 32
Evidence experimental
Illumina [1]

Mature nta-miR6150-3p

Accession MIMAT0058136
Description Nicotiana tabacum nta-miR6150-3p mature miRNA
Sequence 51 - AAGAUGGAUUUAAGGAAAGGAU - 72
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28